Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015858433.1_cds_XP_016513900.1_26396
CDS Infomation

[gene=LOC107830771] [db_xref=GeneID:107830771] [protein=probable protein phosphatase 2C 58 isoform X3] [protein_id=XP_016513900.1] [location=complement(join(226440..226577,227014..227168,227645..227924,228182..228568,229276..229317,229477..229515,229912..229941))] [gbkey=CDS]
Sequence

ATGGAAGGTTCTGATTTTGTTAGAATTAAGAGGGGGAAATCAGGTGATCCAGATATCATT
AAGATAAGGAGGACATCGACCCCAGATGATGTGGCATCTGTTCTTTTGAAGGAGAGAGAG
AGGCAAGAAGTGTATGGAGCAGGCAGAGAGATTAACAGCACCGCGGAACGAGATGAGGAT
GATGCAGAAGATGAATACTATGATGGTGATGATACTGGAGACAAAGATGAGGATGATGGA
GAAGTTGTTGATGACCCTGAAGAAGACGGTGGGGGTGTAGAAGTCAGCGTTGGAGATCAG
AAGCAGCAGAGGCGTGTCAGCCACGGATTTCATTTAGTTGAAGGCAAGATGAAACATGGG
ATGGAAGATTATCTGGTGGCAGAAAATAGGAAAATGGATGGACATAACCTGGGACTCTAC
GCAATATTTGATGGTCATTCAGGACGTGAGGTTGCAGAATATTTGCAAAGCCACCTTTTC
GACAATATACTGAGTGAGCCTGATTTTTGGAAGAATCCTGTGACTGCATTTAAGAAGGCT
TATAGAGATACAGATAACGACATTCTAGAGAATGTGGTTGGAGCACGAGGTGGCTCAACA
GCAGTGACAGCCATATTAATCGATCAGAAGCAGTTGCTAGTGGCCAATGTAGGGGATTCA
CGTGCAATACTAATTCAAAGAGGAAATATCAAGCAAATAACAGTTGATCATGAACCAGAT
AAGGAGGAAGAAAGAGACCTAGTTGAGAGCAAAGGAGGTTTTGTTATTAAGGGGCCAGGG
AATGTTCCACGGGTGGATGGCCAACTAGCCATGACAAGGGCATTTGGAGATGCAAAACTG
AAAGACCATATCACTGTGGAACCTAATGTGACAATTGAGAAAATAGACAAAGACACTGAT
TTCATAATCTTGGCCAGTGATGGCTTGTGGAAGGTAATGTCGAATGAAGTAGTAGCAGAA
TGCATTAGAGGGATTGAGCATGGGAAGAAAGCAGCAGAAGAGTTGATCACTGAAGCACTA
ATGAGGGGGAGTCCCGACGATATTTCTTGTGTCGTAGTGATGTTTCACTGA

Peptide Sequence

PEP ID

XP_016513900.1
PEP Infomation

PREDICTED: probable protein phosphatase 2C 58 isoform X3 [Nicotiana tabacum]
Sequence

MEGSDFVRIKRGKSGDPDIIKIRRTSTPDDVASVLLKERERQEVYGAGREINSTAERDED
DAEDEYYDGDDTGDKDEDDGEVVDDPEEDGGGVEVSVGDQKQQRRVSHGFHLVEGKMKHG
MEDYLVAENRKMDGHNLGLYAIFDGHSGREVAEYLQSHLFDNILSEPDFWKNPVTAFKKA
YRDTDNDILENVVGARGGSTAVTAILIDQKQLLVANVGDSRAILIQRGNIKQITVDHEPD
KEEERDLVESKGGFVIKGPGNVPRVDGQLAMTRAFGDAKLKDHITVEPNVTIEKIDKDTD
FIILASDGLWKVMSNEVVAECIRGIEHGKKAAEELITEALMRGSPDDISCVVVMFH

Transcript Sequence

Gene sequence data has not been registered.